Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIYFAAPMFAKSDLLYNQQLVKEIRELSSELSIYLPQENEAINDKTAYADSRMIALADTEKVLASDLMIALLDGLTIDAGVASEIGVAYAKGIPVIGLYTDTRQQGGTHPKKIAALQETAENQFHYLNLYTIGLIKLNGKVVSSEIELLSEVKRFLDGGTFSD
3EHD Chain:B ((6-161))-KIYFAGPLFSQADLRYNAYLVEQIRQLDKTIDLYLPQENA--NDKSAYADSKMIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKLNGRVVSSEEDLLEEIKQRL-------


General information:
TITO was launched using:
RESULT:

Template: 3EHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 589 -96097 -163.15 -624.01
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.91

3D Compatibility (PKB) : -163.15
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.465

(partial model without unconserved sides chains):
PDB file : Tito_3EHD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EHD-query.scw
PDB file : Tito_Scwrl_3EHD.pdb: