Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYSIGQVSEMFGLPVSTLRYYDKEGLFPDIQRVS-GIRKFSENELEALRVIDCLKKSGLEIKDIKQFMEWSKEGSKTFEVRKELFEKQKEVVEKEIAKLERVLAMLNYKSWYYEEAIKAGNEEAVLTMIPDDLPQHVKEAYVHSH
5D8C Chain:B ((5-128))-YTTAKAAEKIGISAYTLRFYDKEGLLPNVGRDEYGNRRFTDKDLQWLSLLQCLKNTGMSLKDIKRFAECTIIGDDTIEERLSLFENQTKNVKCQIAELKRYLDLLEYKLAFYQKAKALGSVKAV--------------------


General information:
TITO was launched using:
RESULT:

Template: 5D8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 280 -1675 -5.98 -13.62
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -5.98
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.654

(partial model without unconserved sides chains):
PDB file : Tito_5D8C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D8C-query.scw
PDB file : Tito_Scwrl_5D8C.pdb: