Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGSQLHSATAAATMTSTAVSSASAEPSPPTGSSSTAIMSSSLTALAQQQQRLLVSSLLPCDGPLQYVDPTADGLPGTSPSCSEEHNSCTRPDAAQQDRAVSMRVPHATAHERSEHASNDPGPSPPFLPAAEERLTGRSPDAADATSHLDHDGAADCATSSSSTATASTISMHITETCVLKDTLPAPPMQDQSSSEGGVDATAARYSSSPLVNAGSDATLTMTGMRSATPSSPLKAQSNSLQPKESAKVAIDAVSRGSAGQQPSASGGLTTMMTTATSTNTTTAARGLPRTMLPDTLSACTTMKGSETLSSQAGSLMLPLSDGTPPSCSMKAATAALSGPRREKRRPPSLFSSSPATTSLTVATRPVLITPAVSRQEDRSLTTSVTQTASSVSQTNQPLHGQVQRPPAPLPRTPGAPSPLSSTLVSSALPTHGDGGVEEDADGERLSTLVVRRDLHELAATRLPMNPASYAPVHVKLPAVLPTTSPPLRSGRPAHPIAAQQHRAACESQGGLTGSSGASTAAHHSAAGATTPAAIAPVSTPSSVTMFHYGSFQAGYASTAAAGGAVTPNATPLLSNSSLCGFANYCGAGSLGSGSAPAASLSTATSTACANRLQPPSAARLSVTGMGGGGGGAVAGVLSPLSLSGAAATARTVRRRAPPPLLFRLRSPVGPAPPSTAVSANDTSGEMTSPGSVAPPSSASRTATSAAAAAASAGACSSVLTTPPLNSRSMGMTMNSGSASDLASTMADRPARGSGCNPPATPARSGPFARAHGSVAQNLNTFSSSTRSGGLVRISHDRRTLVAGMFRVSRDGCLTVRNMLLLNPTRIDAGSATGGAAGPGCTCGSFMGSSTTGTGGGGSRSRPLQLLHPQRSATNYSPVSSNGGLVGRMQLLGPGGGNDLGGGGGAGGGAGGLGPMTPNTTGSDWYSPHAYHGGGGGSGNTRNDXXXXGGKRGGANTTANASFTLFSTSMDTPFSPITYSMDSQRLALPSPLGVHHDRAGAAAGPPPQLLGTVCENTATSHFLGASGSPHQQPQPHDGLLPGSHHVTETNASPTRNLGFGMVTGGAAAAAQQQVATPNSTTALGRPSGGSGGNICHAQLRRQASNGWLPGALGATNTASPPPFAAAGGAGGMLNAGAFTDTDTANSLLLPYADIPTYRGGIASATAGSRVDSPSGHTNPGGFRTTTTAATATTAAAPMMGGSGATQNTSFPPLPPNVVRLRDLDILSTTCGEGASATVFVAIHKPTGRRLAVKRVDLSPLCLGCSSPFLRSGAVSSGRINQLQRIVVRELQVLHLTYRSPFMVKVYNAFFLAEVAALDIVMEFMHYGSLDHLADCLQQHARMVRGSQQERHRLLTGDDDQDDGDGGGHSGRCGSVHGGSPSVPPLLCDAPEAPQVTEGFLKDTSAAGVGRSGTGGDTERRPSITSTSPKLLDSQRTLAERAPPSAPRPCISRVVDTTGSSDVDSIACGSGGVPCHPLTGGYKHIYGSNDSLLLDSYSVKSDCGTDDSESDDGSGLVEEPLGVTERLVAVVGEQLLRGVRDMHSRGYIHQDIKPGNVLV--NEHGVVKLSDFGLSQRCDSTGLGIKNDMLTYVPPPSVAPAQSITPLQSPSLTVLPLTGARGRRAPFVWHAQRGSIGAGISGQLGSGMVGTTPPEMGSSAEGLVFSSTTNSLLAQRDGMDVLEAESTSSEEGPGEWDATRRGRSGLNPSSSSSDDAGDCCGTDKYMSPERQRGEPYGKPADIWAVGVTLAEFAVGEYPYDLKDVIDEFDRVSRMDKPVDVLQFNKHRAVPLGTVFADFCRLATLPTASQRPTAQELLEHPFFKQWHRPFNLKDYLAARVPVPSNRLKEDYLAKQRERPPEGQQPAGPPG |
2X4F Chain:A ((86-351)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSFYTVSKTE-ILG-----QVHKCEETATGLKLAAKIIKTRGM--------------------KDKEEVKNEISVMNQ-LDHANLIQLYDAFESK--NDIVLVMEYVDGGELFDRII---DE------------------------------------S-----------------------------------------------------------------------------------------------------------------------------------------------YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE------------------------------------------------------------------------------------------------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL-----EDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKL------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X4F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1271 -74116 -58.31 -286.16
3D Compatibility (PKB) : -58.31
2D Compatibility (Sec. Struct. Predict.) :
1D Compatibility (Hydrophobicity) :
QMean score : ?
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