Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequencePSDGPEAPEELCFTTIIRRRDGFKYAEKGPIGQKIAFLAGLNCTVQKGCKLACTPAHYGLKYKVSCRPA
5TVO Chain:B ((1-59))SFEGPEKRLEVIMRVVDGTHVSGLLAHDDDVWQKVIDAICAHIVSREF-------NEYIRSYVLSE---


General information:
TITO was launched using:
RESULT:

Template: 5TVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 105 -10107 -96.26 -171.31
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -96.26
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.031

(partial model without unconserved sides chains):
PDB file : Tito_5TVO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TVO-query.scw
PDB file : Tito_Scwrl_5TVO.pdb: