Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceRCTIEIRNSVGAVVGSTCITAGQPGSVQSIQSGATYTFKTSEFCGVGATN-ELIKDESLSKGGPC
2MM0 Chain:A ((1-64))NCVANILNINEAVIATGCVPAGGELRIFVG-SSHSYLIKATSSCGLSLTNQVFINGESVQSGGRC


General information:
TITO was launched using:
RESULT:

Template: 2MM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 279 -21467 -76.94 -340.74
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -76.94
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.362

(partial model without unconserved sides chains):
PDB file : Tito_2MM0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MM0-query.scw
PDB file : Tito_Scwrl_2MM0.pdb: