Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDD-----TPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPN------------SLEIAHKRGIKIV------WTIQKDSNAPHPNTTKITVKNAH--KTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
4RQO Chain:B ((19-220))----MNISVFDLFS-IGIGPSSSHTVGPMLAANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPETVDPASMIPRMHEILDSNLLNLAGKKEIPFHEATDFLFLQKELL-PKHSNGMRFSAFDGNANLLIEQVYYSIGGGFI--TTEEDFD------NPPP-YP----FATATELLKLCKKHHLTIAELMLVNE-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 791 -8459 -10.69 -50.65
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -10.69
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_4RQO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RQO-query.scw
PDB file : Tito_Scwrl_4RQO.pdb: