Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKRILLLEKERNLAHFLSLE--LQKEQYRVDLVEEGQKALSMALQTDYDLILLNVNLGDMMAQDFAEKLSRTKPASVIMILDHWEDLQEELEVVQRFAVSYIYKPVLIENLVARISAIFRGRDFIDQHCSLMKVPRTYRNLRIDVEHHTVYRGEEMIALTRREYDLLATLMGSK-KVLTREQLLESVWKYESATETNIVDVYIRYLRSKLDVKGQKSYIKTVRGVGYTMQE
1YS7 Chain:B ((22-231))------------------SLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETI---TVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG-PRLLHTVRGVGFVLR-


General information:
TITO was launched using:
RESULT:

Template: 1YS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1013 -16841 -16.62 -81.75
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -16.62
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_1YS7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YS7-query.scw
PDB file : Tito_Scwrl_1YS7.pdb: