Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLEHKNIFITGSSRGIGLAIAHKFAQAGANIVLNSRGAI--SEELLAEFSNYGIKVVPISGDVSDFADAKRMIDQAIAELGSVDVLVNNAGITQDTLMLKMTEADFEKVLKVNLTGAFNMTQSVLKPMMKAREGAIINMSSVVGLMGNIGQANYAASKAGLIGFTKSVAREVASRNIRVNVIAPGMIESDMTAILSDKIKEATLAQIPMKEFGQAEQVADLTVFLAGQ--DYLTGQVIAIDGGLSM
3SJ7 Chain:B ((11-252))-----KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSD-TDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM


General information:
TITO was launched using:
RESULT:

Template: 3SJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1313 -1466 -1.12 -6.18
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -1.12
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_3SJ7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SJ7-query.scw
PDB file : Tito_Scwrl_3SJ7.pdb: