Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLLQLQDVTYRYKNTAEAV--LYQINYNFEPGKFYSIIGESGAGKSTLLSLLAGLDSPVEGSILFQG---EDIRKKGYSYHRMHHISLVFQNYNLIDYLSPLENIQLV-------------NKKASKDTLLELGLDESQIKRNVLQLSGGQQQRVAIARSLVSEAPVILADEPTGNLDPKTAGDIVELLKSLAQKTGKCVIVVTHSKEVAQASDITLELKDKKLTETRNTSK
1L2T Chain:B ((1-220))--MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKD-----------


General information:
TITO was launched using:
RESULT:

Template: 1L2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 985 31222 31.70 154.56
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : 31.70
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_1L2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L2T-query.scw
PDB file : Tito_Scwrl_1L2T.pdb: