Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFVARDARGELVNVLEDKLEKQAYTCPAC-----GGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVW----ELDKGKQVLRLKYLIYQDL--RGKLHYQIKEFSYGQGSLLEILRLPYKKQKISHFTVSEDKDICRYIRQQLYYQNLFWMKEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKL-YPPAFYQQYFLKNMVE------
4ID9 Chain:A ((21-341))MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRM---HITDTRDMVAGILLALDHPEA-----AGGTFNLGAD-EPADFAALLPKIAALTGL-----PIVTVDFPGDGVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL


General information:
TITO was launched using:
RESULT:

Template: 4ID9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1648 -1426 -0.87 -4.71
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -0.87
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.144

(partial model without unconserved sides chains):
PDB file : Tito_4ID9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ID9-query.scw
PDB file : Tito_Scwrl_4ID9.pdb: