Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITLKSAREIEAMDKAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENFLPLQIGVDGAMMDYPYATCCSLNDEVAHAFPRHYILKDGDLLKVDMVLGGPIAKSDLNVSKLNFNNVEQMKKYTQSYSGGLADSCWAYAVGTPSEEVKNLMDVTKEAMYKGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGIAGRGLRLREGMVLTIEPMINTGDWEIDTDMKTGWAHKTIDGGLSCQYEHQFVITKDGPVILTSQGEEGTY
3TB5 Chain:B ((1-254))MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEG----YKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCV-------DLK--------------------GAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMD-PNGWTAYTEDGGLSCQYEHSLAITKEGPRILTSQGEELTY


General information:
TITO was launched using:
RESULT:

Template: 3TB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1523 -155179 -101.89 -610.94
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -101.89
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_3TB5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TB5-query.scw
PDB file : Tito_Scwrl_3TB5.pdb: