Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTETIKLMKAHTSVRRFKEQEIPQVDLNEILTAAQMASSWKNFQSYSVIVVRSQEKKDALYELVPQEA-IRQSAVFLLFVGDLNRAEKGARLHTDTFQ-PQGVEGLLISSVDAALAGQNALLAAESLGYGGVIIGLVRYKSEEVAELFNLPDYTYPVFGMALGVPNQTHDVKPRLPLDNVVFEEEYQEQSTEAIQAYDRVQADYAGARATTS----WSQRLAEQFGQAEPSSTRKNLEQKKLL
5HEI Chain:H ((1-240))MNEAIRTIQDHRSIRQYTDEAVSDEHLDTIIQSAQSAASSINGQQVTIISVQDKEKKKKLSELAGNQAWIDQAPLFLIFCADFNRAKIAAELNDAPLGVTDGLESILVGATDAGISLEAATVAAESLGLGTVPIGGIRRKPLEVIELLDLPEYVFPVSGLVVGHPSDHSAKKPRLPQAAVHHRESYNHDLKSLIQDYDAEMAEYMKKRTNGADDRNWSQTVSAIYKTIYYPEVRAMLEKQ---


General information:
TITO was launched using:
RESULT:

Template: 5HEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 957 -29441 -30.76 -125.81
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain H : 0.80

3D Compatibility (PKB) : -30.76
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_5HEI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HEI-query.scw
PDB file : Tito_Scwrl_5HEI.pdb: