Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEVRSLEKSFGSKQVLFGIDFQARPGRILGLVGKNGAGKTTIFHSILKFLEY-QGEIGLDGQDIRQETYA------RIGYLPEERSLMPKLTVLEQVRY-LATLKGMDAKEVKEKLPQWMKRLKVKGKLTDKIKSLSKGNQQKIQLIITLIHEPDLIILDEPFSGLDP-VNTELLKQVIFQEKERGATIIFSDHVMTNVEELCDDILMIRDGRVVLHGPVQDVRNQYGKTRLFVSSERSKEELENLPHVKQVSLTKQGSWKLILEDESAGRELFPILTQGQYIATFDQQAPTIDEIFKLESGVEV
3FVQ Chain:B ((5-218))-LHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIAYGLGNGKGRTAQE-RQRIEAMLELTGISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3FVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 992 2812 2.83 13.71
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.71

3D Compatibility (PKB) : 2.83
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_3FVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FVQ-query.scw
PDB file : Tito_Scwrl_3FVQ.pdb: