Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------MKFLPVILSLA---LITNASYANPFDPKPASGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVHKQMPVIQDVWL-EDQFFQVFSNILS--------ETQLGQPIALVVIKDPQINAFAVPG---GLFALNTG-LISSARNIDEIA---------GVMAHEIAH---VSQRHFSRSEEAFK----------GQTLLSLAGLLAG------VALAAQAGGDAGA----AVMLGTQAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATS---RVSFLP----DFWLTHPLTSERMSEARLRANQM-------PKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLA-------------------------------SQKNLAGLLALSAFYLKQ-GDYTQAQATLEQAKSSGKPLVALIQTDIYLGQNKINQAYNSIAPLQMTMPENKAF-SYKLAEVLLRQGKYAQVQTLVQ-RFINKNARDIQGWQLLQQAANLDKNSPLRAVN----------VLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI------------------------------------------------------------------------------------------
4C1O Chain:A ((25-726))PKNMFFNAHHSPVGAFASFTLGFPGKSGGLDLELGRPPRQNVYIGVASLSQPGMYEVLPFFEAGDDESKRYDIENPDPNPEK---PQILVPFPNEMIQREFH----VSTDTWKAGDLTFTIYSPVKSVPNPDTAKEEDLKFALVPAVIAELTIDNTKGTSPRRAFFGFEGNDPYTSMRRIDDTCPPLRGVGQGRITAIVSKHSDVRSALHFSLEDILTTPLEENWTFGLGKVGALIMDTPAGMKRTYQFAVCFYRSGYATAGLDTSYFYTRFFKNIEEVGKYALDHIEALKERAFQSNQLIERDWLSDDQKFMMAHAIRSYYGNTQLLEQEGKPIWVVNEGEYRMMNTFDLTVDQLFFELKMNPWTVKNVLDLYVERYSYYDRVRFPGEEKEYPGGISFTHDMGVANTFSRPHYSAYELYGIDGCFSHMTHEQLVNWVLCAAVYIEQTKDWAWRQEKLPILEQCLESMVNRDHPD----PEKRNGVMGLDSTRTMGGAEITTYDSLDVSLGQARNNLYLAGKCWAAYVALEKIFRDTGKEALAALAGEQAEKCAATIVSYVTEQGYIPAVMGEGNDSKIIPAIEGLVFPYFTNCHEALDPHGRFGEYIRALRKHLQYVLTEGICLFPDGGWKISSTSNNSWLSKIYLCQFIARRILGWKWDEAGAKADAAHVAWLTHPTLSVWSWSDQIIAGEISGSKYYPRGVTSILWLEEG


General information:
TITO was launched using:
RESULT:

Template: 4C1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2625 91032 34.68 194.93
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 34.68
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.157

(partial model without unconserved sides chains):
PDB file : Tito_4C1O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C1O-query.scw
PDB file : Tito_Scwrl_4C1O.pdb: