Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLSQIDEMLI-GD--LDLQFVMPWEFED-LNPEAFREFNRELYAHRFDLDYESYSVDNDIDLHLSNYYSSCETNKLIPSNC-FFKLVEYMLVVLESR-----SFTSLFSNCVEFYNTKYSNEYLTFF--LNLFSTSKSEVARDNLRMYITEIFDDKRYWANNELFDDSLLFEENLQQL--QIIRVM--
2Q3F Chain:A ((3-181))----VKPRILLMGLRRSGKSSIQKVVFHKMSPNETLF------LESTNKICREDVSNSSFVNFQIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQDDYMEALARLHLTVTRAYKVNTDINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIFEAFSKVVQKLIP


General information:
TITO was launched using:
RESULT:

Template: 2Q3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 698 6585 9.43 40.40
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 9.43
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.307

(partial model without unconserved sides chains):
PDB file : Tito_2Q3F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Q3F-query.scw
PDB file : Tito_Scwrl_2Q3F.pdb: