Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKHEIISLRHYRIETEASAHKHRVPLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWGVPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWSLGGALSLCYTALFK---DKDIKNLMILASPIDTHKAGYMGKLYGS---LTKPAQWVRKHTPFRIRQHV-PSEVFHIHGWQNTLGFKLTAPIGNLKTYWQLLKNLDNREFI----VDHATSSSFIDNMLAYPG-----GV---MRDIILRFWIDNELSTGVIKFGELTAYLKDIDCSVLAVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPSGHMGVVSGSQAPTSVWPEMSNWLAMRSD-----------------------------
5T6O Chain:A ((1-389))-------------------------------------SAFEVGRNVAV---TEGAVVFENEYFQLLQYKPLTD---KVHARPLLMVPPCINKYYILDLQPESSLVRHVVEQGHTVFLVSWRNPDASMAGSTWDDYIEHAAIRAIEVARDISGQDKINVLGFAVGGTIVSTALAVLAARGEHPAASVTLLTTLLDFADTGILDVFVDEGHVQGAPCALLRGLELANTFSFLRPNDLVWNYVVDNYLKGNTPVP-------FDLLFWNGDATNLPGPWYCWYLRHTYLQNELKVPGKLTVCGVPVDLASIDVPTYIYGSREDHIVPWTAAYASTALLANKLRFVLGASGHIAGV--INPPAKNKRSHWTNDALPESPQQWLAGAIEHHGSWWPDWTAWLAGQAGAKRAAPANYGNARYRAIEPAPGRYVKAKA


General information:
TITO was launched using:
RESULT:

Template: 5T6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1818 -151255 -83.20 -456.96
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -83.20
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_5T6O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T6O-query.scw
PDB file : Tito_Scwrl_5T6O.pdb: