Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MAGCGCASTCSPTKKASPRFRKALWIALVINALMFVVEIVGGYQAQ----SVSLWA-DALDFAGDAANYALSLVVLSMSLYWRA-------TAALVKGITM---AAFGFFVI---------AKVVWSFFHGVSPEPMVMGAIGVIALIANVSVALMLYA-------------------------FRDGD----ANMRSVWLCSRNDSIANI----AVVLAA--------------VGVFGTGTI------FPDLFVAFVIAYLGVSSGYAVIKQSLQERKQSKLMLGSEA
19HC Chain:A ((1-292))AALEPTDSGAPSAIVMFPVGE-KPNPKGAAMKPVVFNHLIHEKKIADCETCHHTGDPVSCSTCHTVEGKAEGDYITLDRAMHATDIAARAKGNTPTSCVSCHQSETKERRECAGCHAITTPKDDEAWCATCHDITPSMTPSEMQKGIAGTLLPGDNEALAAETVLAEATVAPVSPMLAPYKVVIDALADKYEPSDFTHRRHLTSLMESIKDDKLAQAFHDKPEILCATCHHRSPLSLTPPKCGSCHTKEIDAADPGRPNLMAAYHLECMGCHKGMAV--ARPRDTDCTTCHKAAA-


General information:
TITO was launched using:
RESULT:

Template: 19HC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 695 -46365 -66.71 -221.84
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -66.71
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.013

(partial model without unconserved sides chains):
PDB file : Tito_19HC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-19HC-query.scw
PDB file : Tito_Scwrl_19HC.pdb: