Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKLLKIMQELREKCPWDQEQTSMSLTKYAIEEAYEVEAAIRQGDINEIRNELGDLLLQVVFQSQMFSEQGAFNFQDVVEAISEKLVRRHPHVFQADQFNNLIPEQVSELWKQIKQQEKQGK-PQSRLDEI-KHGPALSQAQEIQKNVAKVGFDFETVEDAYTKLEEELDEFKQALKNQ--NSDEIQDEFGDCLFSLVNVGRKLGISSESSLLSTIHKFRSRFAFIEEQAIKQQRTLEDMTLSEMDELWNQAKRQLKSGEKPHAIQHEILEK
3CRA Chain:B ((4-261))IDRLLTIMQRL-----WDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLER--------------------------------QKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEI---------------


General information:
TITO was launched using:
RESULT:

Template: 3CRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 483 9228 19.10 42.72
target 2D structure prediction score : 0.84
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : 19.10
2D Compatibility (Sec. Struct. Predict.) : 0.84
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_3CRA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CRA-query.scw
PDB file : Tito_Scwrl_3CRA.pdb: