Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKINDFPHDNNFWKVEWIGGVYNDIDGEPRIRIYLAQIKSNIERQKTLYNSSLEVRNQQNISSVHDVKIGLIQFIPIGSVWKNGILDQSFTAQYEQFNFNSDTPSEVCFQS---QYGGIAETGLNNTTEWNNHLNDFHYRIVNSEARALGNYINVFYDYNGLSRIYIPSIVILQACYITSPKS----ARHIIFG----QINKLL-DPETSGFIDKE------------TFRIHLHRDYKDIEAPMIANLATNFNAKMGLRTLRQSLV---------KESNITSISTPKRLKISFPFSNDFS-IKVKGKYIMENNKIYGFFVTQIIEFSTKFD-----FTKLVIFRK---NSNQKGKEKAENLQNAYEGCNAVRPSHSESLDDKDESQPLIFTHDQVSNQNLPQSIDFPLCSNISNLEVLKEDKDIQYYQNASYTNLNLRPSNTTSTGPAISSNNGVSELQIEPS--LPVDLEYFFDVLEILNKLGYQFKSIAVNNSRDHPRGIINQFNRFIKNLH-KWHLQDDDQTPRPFIVAEMIYKG------------AFYYLLDIAPRKGAALSAQLIRAYTG---------EQITPTAFA----ILLNDVARTSPKGWSVLDHAKYSQKWQHFRIEHNRNNKPELVAKNIIKKLG----------------
2QYU Chain:A ((8-627))------------------------ATSSPSSPADWAKKLTDAVLRQKA--GETLT-AADRDFSNADFRNITFSKILPPSFMERDGDIIKGFNFSNSKFT-YSD-ISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEVFLQY-SITTQQQPSFIDTTLKNTLIRHKANLSGVILNEPDNSSPPSVSGGGNFIRLGDIWLQMPLLWTENAVDGFLNHEHNNGKSILMTIDSLPDKYSQEKVQAMEDLVKSLRGGRLTEACIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFAHQCQTYNDVPLPAPDTYYQQRILPVLLDSFDRNSAAMTTHSGLFNQVILHCMTGVDCTDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSP---------DWTTRAADNFLLLSSQDS------DTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHDFPVFLAAFNQQATQRRFGELIDIILSTEEHGELNQQFLAATNQKHSTVKLIDDASVSRLATIFDPLLPEGKLSPAHYQHILSAYHLTDATPQKQAETLFCLSTAFARYSSSAIFGTEHDSPPALRGYAEALMQKAWELSPAIFP--SSEQFTEWSDRFHGLHGAFTCTSVVADSMQRHARKYFPSVLSSILPLAWA


General information:
TITO was launched using:
RESULT:

Template: 2QYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2477 65269 26.35 122.23
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 26.35
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.235

(partial model without unconserved sides chains):
PDB file : Tito_2QYU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QYU-query.scw
PDB file : Tito_Scwrl_2QYU.pdb: