Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNSEFQPNWLYPPSEVIKNFIQLNNIDTSAFDVSTKKIIDDLVNQNTKIDLYTSEVLKEAIGGTTQFWLNIQNQFTINSLRIQNSSVDNNFSEYRNLVNELKKLHWTPESKYDYLDQINLKSFFGISEFSLLTKKYIVQHNLRVKFKNIGQYNSSELNVATLIRKAELEAKKQPILSPWNKLLFIEKLQEIKKLSKVKGFKNFRNELLSICNQC-GVAFIVLDTLNKSPIRGISKFLDSNIGLIIVTTKYNKDDVFWQTFFHEAGHLVLHSKEMVFSDQGDL-NKEASHNLEEAQADEFMLTHILHPYTIEEVTNMFNTRIMYKSKTESWRNICQIARQVNISPSLLTGILKFQGIIPYSYFTNGHEKLYD
3DTE Chain:A ((10-176))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALAAAKARMRELAASYGAG--L-PGRDTHSLMHGLDGITLTFMPMG---QRDGAY--DP-EHHVILINSQ-VRPERQRFTLAHEISHALLLGDDDLLSDLHDEYEGDRLEQVIETLCNVGAAA-LLMPAELID---DLLTR-----FGPTGRALAELARRADVSATSALYALAERTA---------------


General information:
TITO was launched using:
RESULT:

Template: 3DTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 614 -18866 -30.73 -120.93
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -30.73
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_3DTE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DTE-query.scw
PDB file : Tito_Scwrl_3DTE.pdb: