Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVAQIRIGQGMDVHAFEEGKFVTLAGVQIPHTHGLKAHSDGDVVLHALCDALLGALALGDIGQHFPDTDPEFKGADSRVLLKHVYQLILDRGYHLNNADITVACERPKLAKYNLEMRQSIADVLNVDLNQISIKATTTEKLGFTGRQEGILATATVLISH
5B8F Chain:C ((8-161))----MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALL--


General information:
TITO was launched using:
RESULT:

Template: 5B8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 857 -128784 -150.27 -836.26
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain C : 0.88

3D Compatibility (PKB) : -150.27
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.580

(partial model without unconserved sides chains):
PDB file : Tito_5B8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5B8F-query.scw
PDB file : Tito_Scwrl_5B8F.pdb: