Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPFWYNTALHLLKPFYRWRIKRRAESLELYQQECLERFGPFEAPKNVK-AIWFHAVSVGETNAAQPLIEYYLKLGQPVLVTNTTKTGQARAKSLFLKEPYLDLFQAVYLPVDQKPLLKKFFELYQPKLLALVETELWPNLIDQAKLQHVPCLLLNARLSEKSAKGYGKVSGLTAGMLKQLDWVLAQDSATRQRYVELGLDEHKSQVVGNIKFDIHAPEAFIKQAAQLRQQWYLENRQVVTIASTHAPEEQQILEAFAPYLNSDRELVCIVVPRHPERFDEVFEICQNLNLITHRRSMGQSIHASTQVYLADSMGELWLWYALSQVCFVGGSLNEPGGGHNILEPMVLNVPTVVGPRYFNFQTIVDEFIDENAVLIAQDAQQVVDIWLACLAEPEATEQLVAQAHKVLQRNQGSLQKHIGVINRYLAEKS
2XCI Chain:A ((20-373))-----------------------------RHMQFEVLKRFFPKESLKNCKGALWVHTASIGEFNTFLPILKELKRE-HRILLTYFSPRAREYLKTKSDFY-----DCLHPLPLDNPFSVKRFEELSKPKALIVVEREFWPSLIIFTK---VPKILVNAYAKGS---------LIEKILSKKFDLIIMRTQEDVEKFKTFGAK--RVFSCGNLKFICQKGKG------------IKLKGEFIVAGSIHTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFE-----NLEGDVILVDRFGILKELYPVGKIAIVGGTFV-NIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSVKKEI-KVEEKSREIKGCYLEKLREFLRG---------


General information:
TITO was launched using:
RESULT:

Template: 2XCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1909 -51585 -27.02 -146.13
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -27.02
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_2XCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XCI-query.scw
PDB file : Tito_Scwrl_2XCI.pdb: