Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQLMIMVTEVGKLEHTCNLLAEVNKGGKVIKVFDYNGNELSMNMDGIVTFNRKRWELPVKVDLK
2APN Chain:A ((5-37))-MAVPLTFTD-AAANKVKSLISEEENTDLKLRVYI------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2APN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 37 -3190 -86.22 -96.67
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -86.22
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.237

(partial model without unconserved sides chains):
PDB file : Tito_2APN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2APN-query.scw
PDB file : Tito_Scwrl_2APN.pdb: