Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MQEFLISTSIV----------ALAEMGDKTQLLALLLSACFRKPIPILIAILLATLINHGISAVLGQ-WITTVLSPAILVWVLAVGFIGMAFWMLIPDEL-DDETASINKWQKFGVFGATFILFFLAEIGDKT-QIATVALAARYDSIFWVM-----------LGTTL--GMMIANAPAVFIGNKLAERLS-IALIHKIGAAIFFIVG-------VSTLVQHYFF-----------------------------------------------------------------------
3G3L Chain:A ((10-305))PAEAKYYIAGTITDATTGQELTTAKVTLGDKSV------TSSFNEQVNYKAEGYALVVSADGYYPVKRQVYLNQVSDGQTSVATVNVALVSVEAAVIPPVVPPTDPETDINEGEATKVADKAVEVAKPSESTVTDMLAGTTATPEEKKALDETLEMAGGMKVGETTPEVLADGSILAITPVKFT-NPIQDAPAMVPYFYNEGCELTGDVKEVAAPVAVAADIQKAFLSNAAKALNMNAGFVQKIGYTRISVLNGYSILGYTIKGQLVSKKLTFLISGKYYEGIVSYQKSVMIYPNYYS


General information:
TITO was launched using:
RESULT:

Template: 3G3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 630 -54598 -86.66 -296.73
target 2D structure prediction score : 0.23
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -86.66
2D Compatibility (Sec. Struct. Predict.) : 0.23
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.057

(partial model without unconserved sides chains):
PDB file : Tito_3G3L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G3L-query.scw
PDB file : Tito_Scwrl_3G3L.pdb: