Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWQQLITWLKQLSFLVKKEFLTIFSDP----ANRAILFVPALMQALLSGYAATYDVNHVDYAILDQSNGQISHELISKLDGSGIFKRVATLEYTEQIKQVTDNRQALLIIAIPNDFESKLNNNQSAPIQVIVDGRN--SSTAMVAGSYLNKIIGQFNQQKFNSALPISLETRTWYNPNQESRWSLMPALIAALSMMQTLLLSALSVAREREQGTFDQLLVTPYTPLQIMIGKALPPIFVGLMQSTIILLIILFWFKIPMNGSIGLLYFGLFSFNVAVVGVGL--SISALSLNMQQA--MLFTFLLIMPLMLLSGLLTPVENMPKALQVATYANPLRFGINLVQRVYLEGASFAQVKLNFLPMIVLGIVTLPLAAWLFRNRLS
4TXD Chain:A ((21-369))----KRDVLAELGLGDLRPYLRSIGDKDRIFPKAHRIEVVFLVRAANYLLLRTEGAGTINMTTLEYSGGAMEVPVIQPQKLMAVTRRQMLQLLREYRDSLDEVSKRWLVQEVIGKAKDLGFKKVSEEWNCTIQGMDGFCPHCTIFGAALTE----QHNEKFGG-LSIGIKTRVRFDPAFATQRRITPET------HNKVTEGHLSM---TGQALFSEVHVEPGT---VFIGRAEL---VDLTEPELVATLYSLATLRELGGRSG--IYGTVRVEILGVKAGKYASTTAYDLAAENAGKGYEEVKKNLKERLEKLGFTPV-DNSKLLAAVDHKDPN----GLFKDLWRSSIDFAEKMVKWVEELKGGG---------------


General information:
TITO was launched using:
RESULT:

Template: 4TXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1795 -57267 -31.90 -175.66
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -31.90
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.194

(partial model without unconserved sides chains):
PDB file : Tito_4TXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TXD-query.scw
PDB file : Tito_Scwrl_4TXD.pdb: