Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRLKVVIKDQFDQESIALAKVRPANDQKLELYKS---VEHIEIDDDIILPNMDLLYENPKDGKIYKLVGPFNEDEL
2KA4 Chain:B ((16-44))-----------------------HLNTEPMEIFRNSVKIEEIMPNGDPLLAG-------------------------


General information:
TITO was launched using:
RESULT:

Template: 2KA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 8 152 19.00 5.85
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 19.00
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_2KA4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KA4-query.scw
PDB file : Tito_Scwrl_2KA4.pdb: