Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIEKFSVEKVLSVHRWTPTLFSFTMTRPSHFKFTAGQFARIGLKVGDELIVRAYSVVSSPFDETLEFFSIVVPDGAFTSNLQHLKVGDELYLEKIPYGYLTLARYQQPLPHDLWLLATGTGLAPFLSMLQDFETWSNYQKINLVYSVRTAAELAYVDRIQEIAE-TFGEGHLGFKFIPIITR--DPSAPLHERLPVLIENGELEKVAGLELSPASSHVMLCGNPQMVDDTKEALKRCGLTMNR-RGEGNIAVENYW
5UFA Chain:C ((16-265))----KFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSRLGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATGFLLPERF--PDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDRLAALSEH-------SFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPESTRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMEN--


General information:
TITO was launched using:
RESULT:

Template: 5UFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1279 -115854 -90.58 -486.78
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain C : 0.83

3D Compatibility (PKB) : -90.58
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_5UFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UFA-query.scw
PDB file : Tito_Scwrl_5UFA.pdb: