Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MSVVDFSQLPPPNLIKELDFEQILAKRKERFISLFPTEQQLQWKEVLERESEPVTKLLEENAYMELILTNQINQDARALLLAFSSGSDLDHIAISYYGLKRLVITPANPNTVPPTAAVMETDENLKERCILSLSGLNTAGATNAYKFFAKSADGRVADASIISHEDNPCFLDVYITQHDSTNYEASPDLINIVQKALDPEDVRPVGDRPTVHSSKAVPYQIQARLYISQTAENVMLLSVAKKRLEKYVENS-KKIGQSIRR--------SAIYAALHVDGVSRVEILNLTSDIEISRSQHAFCTSLDIQIGGTE
5MG8 Chain:B ((23-286))SQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEMGGNLTSLLTKKDSIANKISDQSEHLKVLEDVQRDKVSAF-------GKNMPQLLKLITRETRFQHPPKGP-----MGKYMTVKEQKWHLIIERILGNVING------FIVRSHHDQLILKELMRQSN--CHATVVVGKYDPFDYSSGE-----------PDSQYPTVLKIIKFDDDEVLHTLINHLGIEK-----MLLIEDRREAEAYMKRGIANVTQCYALDPRNRGYGFRIVSTQRSSGISKVTPWNRPPRIGFSSS----------------


General information:
TITO was launched using:
RESULT:

Template: 5MG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 878 16938 19.29 66.95
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : 19.29
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.125

(partial model without unconserved sides chains):
PDB file : Tito_5MG8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MG8-query.scw
PDB file : Tito_Scwrl_5MG8.pdb: