Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKGAIFLRPKQQLFITLLVILGALFNNISVSASAFNFSVTPITSENQIDKRKTYFDLQLDPDQEVEVKAELRNDT-EKEVKIDISVNSATTNSNVMVEYGKNEIEKDMSLIFDLVDYVSY-PQIVTLKPKSVQTVAFHVRMPNE-RFDGVLAGGITFQEIQTEKDQTETKDQSLSIENEYTYIIALLMQQTLNEVAPNLT--LHEVKPDQINARNVILANVQNDQKTYINQVVIETKITKKGHSEVLYQEEKEGLQIAPNTNFSFPTALNGQPLTPGEYHLTMTVLGNENENGKFSRKKGNTTINYTNQWVFEKDFTIDGKVAKELNTTDVTIKKDNNWIYILVASLFLLFILLCILLFVLRKKEEKEK
1KIU Chain:I ((9-194))---------------------------------------------------------VIYPAGQ-KQVQLAVTNNDENSTYLIQSWVE----NADGV-----------------KDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDK---SKLTENTLQLAIISRIKLYYRPAK--LALPPDQAAEKLRFRR-S---ANSLTLINPTPYYLT-VTE-LNAG----TR-----VLENALVPPMGESTVKLPS--D--AGSNITYRTIND-YG--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1KIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 776 25707 33.13 142.02
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain I : 0.59

3D Compatibility (PKB) : 33.13
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_1KIU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KIU-query.scw
PDB file : Tito_Scwrl_1KIU.pdb: