Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTEHFDLANPVTKVDDIPDYEMYSQTIDSLNKRFGNRVLKGIKIGYIASEKDRIIDYLADKDYDLKLLSVHHNGQFDYLDDEVKDMDPAIVIPQYFAQLSEALVVIEADVFAHFDYGFRVFGLSVAEFKQYEAQFLPILDQVIKNKLAFELNAKSAYLY-D-----NLALYEYVIDLCLSRGGTLF
3WYZ Chain:A ((35-174))VFTKKLVLED-------PPDWGSLKEELKELRGKYG--K-VALLLVTRK--PSLIREVKS--RNLKALLYVQGGD---------------------MRINRMAIES-GVDALISPWFGRKDPG--------FD---HTLAGMAARRGVAIGFSLSPLLNANPYGRAQILRFMMKTWQLVKKYRVPRF


General information:
TITO was launched using:
RESULT:

Template: 3WYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 587 -60287 -102.70 -449.90
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -102.70
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3WYZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WYZ-query.scw
PDB file : Tito_Scwrl_3WYZ.pdb: