Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFGCWKEQKKNSKMSLEGEKMKKKGKAKRWLVNILLFLLLLVGLALIFNEQIKDYFVRETGDKYAIANVTKEDLKKNNDKDVSFDFDAVEPMTTEGVMRSQMRGTDLPVIASIAVPSVSINLPVFKGLDNTSLLYGAGTLSPDQEMGKGNYALASHRA----TNPELLFTPLENLEMGAKIYLTDLENVYTYKTFFKEKVAPTDTQLLNEVEGKEIVTLITCGDMDAVTRLVVQGELESVTSIKDATDDMRSAFNLETKTF
4O8T Chain:B ((31-186))----------------------------------------------------------------------------------------------------------KLPVIGGIAIPELEMNLPIFKGLDNVNLFYGAGTMKREQVMGEGNYSLASHHIFGVDNANKMLFSPLDNAKNGMKIYLTDKNKVYAYEIREVKRVTPDRVDEVDDRDGVNEITLVTAEDLAATERIIVKGDLKETKDYSQTSDEILTAFNQPYKQF


General information:
TITO was launched using:
RESULT:

Template: 4O8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 460 -12152 -26.42 -79.95
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -26.42
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_4O8T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O8T-query.scw
PDB file : Tito_Scwrl_4O8T.pdb: