Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIISIILVVLVAFLAGMEGILDEFQFHQPLVACTLIGLVTGNLEAGIVLGGTLQMIALG---WANIGAAVAPDAALASVASAIILVLGGQGVKGVPSAIAIAVPLAVAGLFLTMIVRTIAVPIVHLMDAAAEEGNIRKVEMWHIIAVCLQGVRIAVPAAALLFIPAQTVQSFLESMP-AWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAAISQLTLIALGALGVALALIYLNLSKMGGSSNNGGGSNSGDPLGDILNDY----------------
4Q0S Chain:A ((12-260))SARTSITRREYDEWVREAAALGKALRYP--------ITEKMVNDSAGIVFG-ADQYDAFKNGMWSGE----------PYEAMIIFESLNEPAVDGLPTGAAPYAEYS-GLCDKLMIVHPGKFCPPHHHG--------RKTESYEVVL----------GEMEVFYSPTPSAESGVELLNFSGMPVGSPWPEGVALPKGRESSYEKLTSYVRLRAGDPKFVMHRKHLHAFRCPPDSDVPLVVREVSTYSHEPTEAAAGNHAPIPSWLGMHDNDFVSDAANTGRLQTAIS


General information:
TITO was launched using:
RESULT:

Template: 4Q0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1131 -97433 -86.15 -425.47
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -86.15
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.192

(partial model without unconserved sides chains):
PDB file : Tito_4Q0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q0S-query.scw
PDB file : Tito_Scwrl_4Q0S.pdb: