Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNPLLIVGTRQWKGVHSVMAYKYLVIVESPAKAKTIEKYLGRNYKVMASVGHIRDLPKSKMGIDFENNYEPHYISIRGKGDVIKSLKAAAKKAQKVYLASDPDREGEAIAWHLAYLLGLDLKEKNRVVFNEITKDAVKAAFKEPRTIDVDLVDAQQARRTLDRIVGYSISPILWRKVKKGLSAGRVQSVALKIIIDREKEIREFVPEEYWSIDGNFKKARKKFKANFWGIDGKKKKLPDAQSVKEVTARIDGTDFEVKKVEKKERKRNPANPFTTSSLQQEAARKLNFRTRKTMMVAQQLYEGITLGKQGTVGLITYMRTDSTRIADTAKAEAAAFIEDTYGKEFSRHDHRKIKNAQGAQDAHEAVRPTSVLRTPDELKQYLDKDQLKLYTLIWSRFVASQMTPAILDTMKVTLEQNGVIFIANGSKI--KFKGFMQVYVEGRDDGKEEKENILPELEEGDVVQSVDIEPKQHFTQPPARFSEATLIRALEENGVGRPSTYAPTLDTIQRRYYVKLTQKRFEPTELGEIVNSLICEFFPQIVDIHFTAEMEGDLDKIEEGTEAWVKVVDRFYKPFEKELTNAEEKIEKIQIKDEPAGFDCDVCGHPMVIKLGKYGKFYACSNFPDCRNTKPIVKEIGVTCPVCHEGQVIERKSKKNRLFYGCSRFPECEFTSWDKPVGRNCPKCDGYLVEKKVKGGKQVVCVNGDYEEDIQK
2GAJ Chain:A ((7-601))----------------------KYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKK-GELLIASDMDREGEAIAWHIARVTNTL-GRKNRIVFSEITPRVIREAVKNPREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDGLTAEIDVK-------EKKFFDAETLKEIQSI---DELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETK-DGHIAFITYMRTDSTRVSDYAKEEARNLITEVFGEEYVG--------------AHEAIRPTNVFMTPEEAGKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTER-------NTGEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKKIRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVV----DFPTNQ-KCS-CGKEMRLSFGKYGFYLKCE----CGKTRSVKND----------EI-AV--IDDGKIFL----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3028 -53911 -17.80 -93.11
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -17.80
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_2GAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GAJ-query.scw
PDB file : Tito_Scwrl_2GAJ.pdb: