Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASILLIGFMGAGKTTIGKGLAQCLQKEYVDLDTKIEEHIQLSIAEYFHYYGEKSFRKVESDILR-KLSNEDKIIATGGGIVQSAENRRFLKTQPIVLYLEAEADCLVDRIQQDETSIRPLALGKTR-EEIKALLAQRLSWYEESATHRINTTNQTPEKIIDTIIERIKSI
2IYR Chain:B ((6-167))----VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVV-YLEISAAEGVRRTGGN--TV--LLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQ--


General information:
TITO was launched using:
RESULT:

Template: 2IYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 714 -8642 -12.10 -54.70
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -12.10
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_2IYR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IYR-query.scw
PDB file : Tito_Scwrl_2IYR.pdb: