Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKALITGITGQDGSYLAEFLLEKGYEVHGITRRASISNTAHIDHLM--------GKITLHDGDLSDSSSLIRIISIVQPDEIYNLAAQSHVQVSFDVPEYSGDVDALGVLRILEACRILGLTKKTKVYQASTSELYGKVEEVPQRETTPFHPYSPYAVAKQYGFWITKEYREAYGMFAVNGILFNHESERRGENFVTRKITLAAGRIAEGLQDHLELGNMDSLRDWGYAKDYVECMWMILQHETPEDFVIATGEQHTVRDFTEKAFAANGITIRWEGTGIDEKGYDVETGKMLVCVNPQWFRPTDVDNLWGDPTKAKTVLGWNPQKTSYEELVSIMAKHDRELAKREAALKKASDLIE
5IN5 Chain:D ((18-359))---ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKP-RVAFDELVREMVHADVELMR-------------


General information:
TITO was launched using:
RESULT:

Template: 5IN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1918 10088 5.26 30.20
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain D : 0.85

3D Compatibility (PKB) : 5.26
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_5IN5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IN5-query.scw
PDB file : Tito_Scwrl_5IN5.pdb: