Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKETRQFIWTYIKIIFALFILGVAINMFLGPHHIAAGGVSGLGILLEAALGFDRAIVILVLNIVMLVLALLFLGKKPFFKVLFGSLVFPLIIAIVPETMITSDRLLSVIFGSAIFALGVAILYKNNSSSGGTTIPPLIFKKYFHLNTSIGLFFTDAFVVSLNLFVFGIEEFLYAILSIAITSIVMTYIETGINRKKSVMVMSEHY-LEDIRLRLSAEIG-RGLTLLEAKGGY-------------NRKSKEVLLIVVTDHEFSRMKPLIEEID-----PSAFVIVSSVAEVMGRGFTYHPIE
4OZN Chain:A ((33-137))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLVMAIIRPDKLADVKTALAE-VGAPSLTVTNVSGRGSQKSQWRGEEYTVDLHQKVKVECVVADTPAEDVADAIADAAHTGEKGDGKIFILPVENAIQVRTGK----


General information:
TITO was launched using:
RESULT:

Template: 4OZN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 285 -9985 -35.03 -121.76
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -35.03
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_4OZN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OZN-query.scw
PDB file : Tito_Scwrl_4OZN.pdb: