Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNRVWVEGTIVAALAMVLSLIPIQIGSSFSISLGQIPLTLFALRRGTKAGMLAGFIWGILHFPLGQVYYLSVVQVLIEYPIAYTFAGAAGLMASNVQKGYVDDNTKQIRKSIVFG---ALIGALSRYFWHFIAGVVFWGAYALWGMNSWLFSFVMNGASGLSTAIVTIIVLLGIQQTTPSIFVPDKRQEL
4TKR Chain:B ((38-213))-------LECAIFAAVAMVLSFIPLDIGSSFSISLGMIPMYVIAIRRGFWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRS---NLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGASCLGTVLVSGIIISILLKTSPKLFLP------


General information:
TITO was launched using:
RESULT:

Template: 4TKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 796 -131239 -164.87 -758.60
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -164.87
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.328

(partial model without unconserved sides chains):
PDB file : Tito_4TKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TKR-query.scw
PDB file : Tito_Scwrl_4TKR.pdb: