Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKTKTVVTTFDNVSIKRIAFNFKNAGNAIATNCNGQLDGETEMQTVVKKCGATEVKSKSKPINMTVTITAHVPMEVYRRFNGLKQDGRIKPGIYSYGPDSVGEDFSLAAEIVDDFEENRKLVGMLACTSNTGLTFSIEN-----GADEVAALELETKVMQ---DEFGKFYHEAIVAELEEDLTDQWMTNLSADVIKKTSVVTTTATQSQ
3PG6 Chain:A ((25-159))--------------------------------QKGNQPEGSMVFTVSRDSL-------PGYESFGTIVITYSMK-------AGIQTEEHPNPG-------KRYPGIQRTAYLPDN-KEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE---------------------


General information:
TITO was launched using:
RESULT:

Template: 3PG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 560 -2024 -3.61 -15.94
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -3.61
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.319

(partial model without unconserved sides chains):
PDB file : Tito_3PG6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PG6-query.scw
PDB file : Tito_Scwrl_3PG6.pdb: