Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQEVKSGKVLSPSTPWTQRPVPGIEVADEQQTLKATFTEPTIECPECHALVTRTAISFNAYVCPQCDEHLRMKARDRLNWFFDNVVAELGQEFSAKDPLKFVDSKPYPDRMREAQTKTGETEALIAMQGNLNGVDMIACAFEFDFMAGSMGTVVGDRFVKAAELAIEKRQPLICFAASGGARMQEGMLSLMQMARTSAAIQKLKDTGLPYIVVLTHPVYGGVTASLAMLGDIHIAEPKAMIGFAGKRVIEQTVRETLE-EPFQRAEYLLD-HGVVDQIVH-RHALRDTVSRLVSKLMNLP
4G2R Chain:B ((38-214))------------------------------------------------------------------------------------------------------------------------DRSGVLAAAGTVNGVRTIAFCTDGTVMGGAMGVEGCTHIVNAYDTAIEDQSPIVGIWHSGGARLAEGVRALHAVGQVFEAMIRAS-GYIPQISVVVGFAAGGAAYG-PALTDVVVMAPESRVFVTGP------------MASLGGPETHHKKSGVCHIVADDELDAYDRGRRLVGLFCQ--


General information:
TITO was launched using:
RESULT:

Template: 4G2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 903 -101629 -112.55 -627.34
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -112.55
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_4G2R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G2R-query.scw
PDB file : Tito_Scwrl_4G2R.pdb: