Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKSKKHGKPVKGASKKGSKHDKSKRKAKFIDPTSSVSRDVRETVAALVQEIEREEPVAEEKLQPLKKGKKCQEIAEKEGILVKTGMTKEQAHTIANRLKQQQSTTHRSDGEGDVGSDGGGDGDGGGTEEDYSDTANEPSREYRKGGYHHVVIGEVY-NDRYRVVKKLGWGYFSTVWLVWDYQKERYQAMKIQKSAASYSEAAYDEIKLLSEIMEAD-----PHKNRCCARLNDYFKHTGPNGTHVCMLFDVYGENLLSLMERYEYRGIPLPIVKCIARQVLIGLDHINSI-DIIHTDLKPENVLLSTPKHSIISLMKHFHPPPLHQRPKLTERDPKTMTKSQRRRYYKKLAKEERKTLLGEDDGDHKSRGDEHGSNENGDADSEGSKTDPEWEVERFHHVILADFGNSCWTHKQFTDEVQTRQYRCPEVILGEPYSTPIDIWSCACMIFELITGQFLFDPKKGDDYSRDEDHLALMSELLGDLPESMRLGDGKYRSYYYNSKGDLRNIKDLQYWVLEDVLHQRHKFTKKKAKEIADFLLPMLEYAPDTRATPAAMLRDHDAFFDIQDDDYAPLCFVDEDSGDEEGSASDEEEEETDSDDSSQSYSSAPSSELTAKRSRQPDNDADRSDTFRYWEEHPILNRTYLEERGLTIADIQSVLAGNFLDDAAAHEAAAEVIRLLSEETDRLSNDHGSDGHEADNEDGGDGDNDDEEETTQGSEGPEKVVVGKAAPCDDGVDEDEETTDEEEEGSSDGAE
1Q8Y Chain:B ((9-343))-----------------------------------------------------------------------------------------------------------------------------------------------------PAFKGEPYKDARYILVRKLG---FSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP-----------------------------------------------------------------------------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN-GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH--PWLKDTLGM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Q8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1658 4132 2.49 12.71
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : 2.49
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_1Q8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q8Y-query.scw
PDB file : Tito_Scwrl_1Q8Y.pdb: