Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIRFEEKVSTENAQFVCQWSNSLGKSFQEQWMGPRIPFLLTLQALEGVFSIFDEQEFVGFIQKIRLEDSNLHIGRFFINPQKQEQGLGSQALRKFVSLAFENEDIDSISLNVFEANQRAQNLYQKEGFEIVQMVEAPVRKYSILKLE
4PV6 Chain:J ((62-137))----------------------------------------------------------VGFIVGSKYSRTEARILLFAVDERFRRMGVGSALMDAFLSLCRE-QNMLSVRLEVRTDNDEAIRFYKKYGFVITAML-------------


General information:
TITO was launched using:
RESULT:

Template: 4PV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 230 -42390 -184.30 -557.76
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain J : 0.64

3D Compatibility (PKB) : -184.30
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.620

(partial model without unconserved sides chains):
PDB file : Tito_4PV6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PV6-query.scw
PDB file : Tito_Scwrl_4PV6.pdb: