Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVAQAIRNIISPKSVIAQYQKIDFSNKGTIPIRHLNIGFDGKEIDIEFYVNNQFATLFFATLSVFLTYGEDLVIETARHHREFIQD---PILKQRVTSLIGQEAIHSKLHNEFNDAIKELEYPVDLYRFLGENFFKYVFLKFPQPLKLSLMAGIEHFTAVLAEYMMKHEKNFYYTDDAKSRALWMWHMLEESEHKDIAYDVYQILNGNYPLRATGFLMAFITILGLIPTATLLVPVLRKPKELLTRKFWKDARRGVNLIFSPKDGVFGSTIGQIFDYLRPNFHPNDHDTTQYLEYYKNKLLNEGGAIAPYFVKEFTPPVRAVS
1NF6 Chain:F ((22-147))--------------------------------------------------------------------MELHAIHQYMNQHYSLDDMDYGELAANMKLIAIDEMRHAENFAERIKEL---GGEPTTQKEGKV-VT-----GQAVPVIYESDADQEDATIEAYSQFLKVCK--E-QGDIVTARLFERIIEEEQAHLTYYENIGSHIK---------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 421 -7812 -18.56 -63.51
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain F : 0.50

3D Compatibility (PKB) : -18.56
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.50
QMean score : 0.276

(partial model without unconserved sides chains):
PDB file : Tito_1NF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NF6-query.scw
PDB file : Tito_Scwrl_1NF6.pdb: