Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVMQLLPELNSGGVERGTLEIARALVAQGHQSLVVSNGGRLVSQLEAEGSTHLTLPIHKKSLSSLWQIRPLRQLIEEHQPDIVHVRSRVPAWLTHFALRKI--PANKHPHLISTVHGFYSVNRYSAIMT---QAEKVIAVSDSVVKYITDHYKNCPPQDIVRIYRGIDPAAFPHNYQPSAQWFNQVFNDFPELENKFLLCLPGRITRLKGHESLIELMQKLGEQYPQLHAVVVGGADVKKQTYLSELQNTIQSKGLADKITFVGHRSDIREWLAFSDIVLSLSNQAETFGRTALEALSVGTPVIGWNRGGVAEILSHVYPQGLVEAENEKALVERVKHHIEQPQTVAPVTMFSLKDMCDQ--TLELYQSVLK-----
4XSO Chain:A ((7-384))MKILFLDQSGKPGGAELCLIDIAKPY--RDRALVGLFADGAFKTLLEQHHIPVEVFTNQPSLGQLAPLVAKVVQTAHEY--DLIYANTQKALVVGAIASFIARRPLVYHLHDILSPEHFSQTNLRVAVNLANRFASLVIANSQASQTAFIQ--AGGRAELTKVIYNGFDINLYKTSPSDISKLRQQL-----GVANNFVVGHFSRLSPWKGQHILIDALAQCP---PQVTAILVGDALFGEQDYVKELHQQITRLGLENRVKFLGFRADIPQLMAACDLVAHTSTAPEPFGRVIVEAMLCGKPVVAAKAGGAMELVEHGVNGFLTTPGESQELANIINTCIEDTQKTATIASNAQAIASQRFDVVTINQQIAETLSSL


General information:
TITO was launched using:
RESULT:

Template: 4XSO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1970 -38729 -19.66 -110.02
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -19.66
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_4XSO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XSO-query.scw
PDB file : Tito_Scwrl_4XSO.pdb: