Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAIYIGVMTGTSMDGVDIV-AASFEPLQLHATLTVPFEPELRDELMALTLPDDNEIDRMGKADVALAKMIGHGINSLIEKHQLDRSQIKAIGSHGQTIRHRPEHGFTLQIGDPNIITEITQIPVVSDFRRRDMAAGGQGAPLVPAFHQALFQHPSIHRVILNLGGIANVSMLPANNPDGVFGFDTGPANILMDAWCHRHTGHPYDENGDWAAYGHPIRSLLDRLYAHEYFSKEPPKSTGREDFNIDWLDDQLIDWRNDLTYDELEDTPENIQANLLKLTVRAIQKAIYRSNMETGEVYVCGGGAYNSYLLEQLRWRLRKHNWSVQTTDVLGLSPTWVEATAFAWLAMRFVDGLSGNLPAVTGASDFRILGTITAV
4MO5 Chain:C ((4-360))----YLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGPDEIARAAEVEQRWVALAAQGVRELLLQQQMSPDEVRAIGSHGQTIRHEPARHFTVQIGNPALLAELTGIDVVADFRRRDVAAGGQGAPLVPAFHQALFGDDDTSRAVLNIGGFSNVSLLSPGKP--VRGFDCGPGNVLMDAWIHHQRGEHFDRDGAWAASGQVNHALLASLLADEFF------------FNLPWLQEHLARHPALPAAD--------IQATLLELSARSISESLLDAQPDCEEVLVCGGGAFNTALMKRLAMLMPEAR--VASTDEYGIPPAWMEGMAFAWLAHRFLERLPGNCPDVTGALGPRTLGAL---


General information:
TITO was launched using:
RESULT:

Template: 4MO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1930 -70782 -36.67 -205.76
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.85

3D Compatibility (PKB) : -36.67
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_4MO5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MO5-query.scw
PDB file : Tito_Scwrl_4MO5.pdb: