Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLAIASALLSALAVSGAANAYQAEVGGSYNYLDPDNGSSVSKFGVDGTYYFNPVQTRNAPLAEAAFLNRASNVNAHVNYGDNSGTKDTQYGVGVEYFVPNSDFYLSGDVGRNEREIDNTNIDSKVTTYAAEVGYLPAPGLLLALGVKGYDEKD--GKD-GADPTVRAKYVTQVGQHDVNLEAYGAF----------GDLDEYKVRGDYYIDKTLSLGVDYYNNDLT----DKDEFGINAKKFLNQQVSVEGRVGFGD-----------------------NDNTYGVRAAYRF
2FGQ Chain:X ((148-332))--------------------------------------------------------------------------------------------------------FNAGFGYAFDEKQTIG-TADSVGRYIGGYVAYDNG-PLSASLGLAQQKTAVGGLATDRDEITLGASYN--FGV--AKLSGLLQQTKFKRDIGGDIKTNSYMLGASAPVGGVGEVKLQYALYDQKAIDSKAHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGESQTGVQVGIRHAF


General information:
TITO was launched using:
RESULT:

Template: 2FGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 589 8138 13.82 56.12
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain X : 0.60

3D Compatibility (PKB) : 13.82
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.006

(partial model without unconserved sides chains):
PDB file : Tito_2FGQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FGQ-query.scw
PDB file : Tito_Scwrl_2FGQ.pdb: