Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKLIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFS-LFPNKQRIISVLDGQGMVLHVDDLPAKKLKQGDIFAFHGESQVQSELVDGAIRDLNLIYDPAKFHARFQWLNEAAEQAFISSADLIFIFNQGDETEVNVDEHSVQLAAHETLKIEKKSGVTSINFPKKQFKCCYIIELIQR
4E2Q Chain:M ((39-123))---LITPESHVYSPLPDWTNTLGAYLITPA-TGSHFVMYLAKMKEMSSSGLPPQDIERLIFVVEGA-VTLTN-S-SSKKLTVDSYAYLPP------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4E2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 237 -26654 -112.46 -325.04
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain M : 0.60

3D Compatibility (PKB) : -112.46
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.296

(partial model without unconserved sides chains):
PDB file : Tito_4E2Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4E2Q-query.scw
PDB file : Tito_Scwrl_4E2Q.pdb: