Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQDHIEQHRRYI--------VISYAFMFLALFTVIFAAFAYLVARKVAVVDDAEVWIHA---HALWIMRNGILFLLMSVFAVAWFIPLFFFAWDSNLWVTASTVAGVVFSAIAWLFLLNAWLKGLSKYLKNKAVF
3J9O Chain:A ((2-135))-AKNKIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVNNGVDRVLEEMNISFDFEAPNFVSKDPSNLKVNYRIESVKDFRPDAVAKKV-PEIRALLEMKEILASFAKDIENNRNL


General information:
TITO was launched using:
RESULT:

Template: 3J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 239 -9424 -39.43 -76.61
target 2D structure prediction score : 0.23
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -39.43
2D Compatibility (Sec. Struct. Predict.) : 0.23
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.167

(partial model without unconserved sides chains):
PDB file : Tito_3J9O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J9O-query.scw
PDB file : Tito_Scwrl_3J9O.pdb: