Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHSQPLLDCWNLDQILDDLNAHGFAIVNQAYSAEYHTQVAKECSHH--FDEFREAGIQNGVVSTIRSDHILWINESLPVA-EQHVETLTSFCQHLNQAFFLGIKEVEAHFACYNPGEFYALHRDNPQQKNDRIMSTVYYLHPQWQDDWGGQLRLQDKNDIWHIITPEPNRLVIFQSN-LLHEVLVSKQQRLSITAWLRSGNSIWV
4J25 Chain:G ((32-222))-----------LAAVVDDLATHGWSQQAHFLPADLVRALAAECRRRDAE-ELNPA------RETIRGDQIQWIDPGQAEACDQYLAAMDQLRLAINQGLFLGLEDFECHFALYPPGAFYRRHLDRFRDDDRRMVSAVLYLNEGWQPHDGGQLRMFLADGVEHDVEPVAGCLVVFLSGEVPHEVLPAGRERLSLTGWFR-------


General information:
TITO was launched using:
RESULT:

Template: 4J25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 840 -29037 -34.57 -164.98
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain G : 0.76

3D Compatibility (PKB) : -34.57
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_4J25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J25-query.scw
PDB file : Tito_Scwrl_4J25.pdb: