Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQFNPLYSSLNPKLFHIQQPSPLRGAKAGHFNLALAEELQWTDEEKQAWVEICSGQRTFSEFPPLAMVYAGHQFGQWARQLGDGRGLLIAQILNKKGQTIDLHLKGAGPTPYSRMGDGRAVLRSVIREYLAGHALNALGVASSHAVGFTSSTQGVQREKLEPGAMLLRTSECHIRLGHFEWINQYAPELLAEFTQKCIEWHYPECQQEEQPILAFAKAVIRNTAIMIAKWQLVGFAHGVMNTDNLNITGS----TLDFGPYGFMERFRPNWINNHSDYQGRYTYQNQPSIAHWNLWTWLNNLIPLAEPEHKEQFKEALAACLEEFEPTFIEHYTTGLCQKMGLPHFHKDSTECGLSFLRILQAEQLDYTQSFIRLQNKEYKALRDDCLDIRQFDAFLTQYQNIREYQDIDELDANMQQVNPIYILRNHMAQRAIEVAERDDFSEVDRLFKLLNHPYTRQSDLEKPEDLGPLPSDVPDVAVSCSS
1UA2 Chain:C ((116-162))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 96 -5768 -60.08 -134.13
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain C : 0.54

3D Compatibility (PKB) : -60.08
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.158

(partial model without unconserved sides chains):
PDB file : Tito_1UA2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UA2-query.scw
PDB file : Tito_Scwrl_1UA2.pdb: