Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTYAYVRIEPNLQFEFSRYISFFSEYGYKIQKNRLVVEEVSVDKSIVYRDKFLNLISYSLEEGDILVIKSMDCLGNSFEEILDIVNKIDQKKIRLICLDYSKSEINGDLKIFFLHFLKLSAEFEKLFKSDKKNF---KDHKPTRKVGRPEILNNEQKSRVIELFKKGYSVYSLAKEFSVTRTVIQRILNNASKTNIL
4M6F Chain:A ((2-185))--LIGYVRVSTND-QNTDLQRNALVCAGC----EQIFEDKLSGTR--TDRPGLKRALK-RLQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTDS-IDTSSPMGRFFFHVMGALAEVERELIIERTMAGLAAARNKGRIGGRPPKLTKAEQEQAGRLLAQGIPRKQVALIYDVALSTLYKKHPAKRAH---


General information:
TITO was launched using:
RESULT:

Template: 4M6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 512 -27019 -52.77 -149.28
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -52.77
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_4M6F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M6F-query.scw
PDB file : Tito_Scwrl_4M6F.pdb: